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Journal: bioRxiv
Article Title: Contrasting Phyllosphere Mycobiome in two Lycopodiaceae Plant Species: Unraveling Potential HupA-Producing Fungi and Fungal Interactions
doi: 10.1101/2024.01.18.576228
Figure Lengend Snippet: (A) Non-metric multidimensional scaling (NMDS) ordination plot based on the bray-curtis dissimilarity of H. asiatica and D. complanatum mycobiomes. (B) Alpha diversity of endophytic fungi in leaves and stems of H. asiatica and D. complanatum . (C) Differentially abundant taxa between the leaves of H. asiatica and D. complanatum (Wald test, padj < 0.01, log 2 FoldChange > 2). The red font denotes genus with HupA-producing potential in the literature. *** P value < 0.001, ** P value < 0.01, * P value < 0.05.
Article Snippet: The HupA-producing plants H.
Techniques:
Journal: bioRxiv
Article Title: Contrasting Phyllosphere Mycobiome in two Lycopodiaceae Plant Species: Unraveling Potential HupA-Producing Fungi and Fungal Interactions
doi: 10.1101/2024.01.18.576228
Figure Lengend Snippet: Networks of (A) HupA-rich tissues of H. asiatica (including apical shoots, bulbils and young leaves); (B) leaves and stems of H. asiatica , and (C) leaves and stems of D. complanatum . The networks are visualized based on modules. Large modules with ≥5 nodes are shown in different colors, and smaller modules are shown in grey. Nodes represent different ASVs and the size of each node is proportional to the number of degrees. Edges refer to the correlation among nodes, being either positive (solid) or negative (dashed). ASV IDs of potential HupA-producing fungi were labeled. (D) The modules containing potential HupA-producing fungal ASVs as hubs in the network of leaves and stems in H. asiatica . Details of network topological attributes are listed in Supplementary Table S6. The node information for the three networks is in Supplementary Table S7, Supplementary Table S8 and Supplementary Table S9 respectively.
Article Snippet: The HupA-producing plants H.
Techniques: Labeling
Journal: bioRxiv
Article Title: Contrasting Phyllosphere Mycobiome in two Lycopodiaceae Plant Species: Unraveling Potential HupA-Producing Fungi and Fungal Interactions
doi: 10.1101/2024.01.18.576228
Figure Lengend Snippet: A radar plot comparing the number of ASVs belong to the main fungal genera within modules containing PHP fungi in network A (HupA-rich tissues of Huperzia asiatica , i.e., bulbils, apical shoots, and young leaves), network B (leaves and stems of H. asiatica ) and Network C (leaves and stems of Diphasiastrum complanatum ). The black font labels candidates that we believe are promising for future co-cultivation investigations (i.e. was detected in at least four modules in Network A or B).
Article Snippet: The HupA-producing plants H.
Techniques: